Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase/oxidase | KR76_RS26275 | Not Available | + | 5354025 - 5355587 | 53271.8 |
| tetr/acrr family transcriptional regulator | KR76_RS26280 | Not Available | - | 5355616 - 5356188 | 20811.0 |
| nad-dependent epimerase/dehydratase family protein | KR76_RS26285 | Not Available | + | 5356337 - 5357269 | 31343.5 |
| sigma-70 family rna polymerase sigma factor | KR76_RS26290 | Not Available | + | 5357361 - 5358386 | 37787.8 |
| tigr03086 family metal-binding protein | KR76_RS26295 | Not Available | + | 5358392 - 5358973 | 19869.8 |
| low temperature requirement protein a | KR76_RS26300 | Not Available | + | 5358989 - 5360242 | 45702.9 |
| mfs transporter | KR76_RS26305 | Not Available | - | 5360246 - 5361565 | 45413.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | KR76_RS26310 | Not Available | - | 5361562 - 5363034 | 51496.5 |
| stas domain-containing protein | KR76_RS26315 | Not Available | - | 5363472 - 5363975 | 17644.4 |
| penicillin-binding transpeptidase domain-containing protein | KR76_RS26320 | Not Available | - | 5364092 - 5366029 | 65431.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.