Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | KR76_RS25530 | Not Available | + | 5208393 - 5209031 | 20637.1 |
| cupin domain-containing protein | KR76_RS25535 | Not Available | - | 5209035 - 5209397 | 12892.5 |
| hypothetical protein | KR76_RS25540 | Not Available | - | 5209476 - 5209739 | 9999.83 |
| s-(hydroxymethyl)mycothiol dehydrogenase | KR76_RS25545 | Not Available | - | 5209736 - 5210845 | 37643.2 |
| nad(p)/fad-dependent oxidoreductase | KR76_RS25550 | Not Available | - | 5210863 - 5212158 | 45449.2 |
| fad-binding oxidoreductase | KR76_RS25555 | Not Available | - | 5212289 - 5213698 | 49047.7 |
| alpha/beta hydrolase | KR76_RS25560 | Not Available | - | 5213698 - 5214612 | 32410.2 |
| metal-dependent hydrolase family protein | KR76_RS25565 | Not Available | - | 5214699 - 5215940 | 45185.1 |
| mfs transporter | KR76_RS25570 | Not Available | - | 5215937 - 5217247 | 46195.9 |
| abc transporter atp-binding protein | KR76_RS25575 | Not Available | - | 5217396 - 5218175 | 27629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.