Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | KR76_RS28600 | Not Available | - | 5058030 - 5058554 | 18197.9 |
| molybdopterin cofactor-binding domain-containing protein | KR76_RS24880 | Not Available | - | 5058547 - 5061906 | 119290.0 |
| (2fe-2s)-binding protein | KR76_RS24885 | Not Available | - | 5061903 - 5062439 | 18227.7 |
| cysteine hydrolase family protein | KR76_RS24890 | Not Available | - | 5062513 - 5063148 | 23508.0 |
| dihydroorotase | KR76_RS24895 | Not Available | - | 5063138 - 5064544 | 50440.2 |
| m20/m25/m40 family metallo-hydrolase | KR76_RS24900 | Not Available | - | 5064904 - 5066148 | 43251.3 |
| dabb family protein | KR76_RS24905 | Not Available | - | 5066112 - 5067320 | 46265.4 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | KR76_RS24910 | Not Available | - | 5067333 - 5067857 | 19984.4 |
| aromatic ring-hydroxylating oxygenase subunit alpha | KR76_RS24915 | Not Available | - | 5067854 - 5069197 | 50625.5 |
| ferredoxin | KR76_RS24920 | Not Available | + | 5069403 - 5069702 | 11030.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.