Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | KR76_RS24385 | Not Available | - | 4953430 - 4954938 | 53533.3 |
| vwa domain-containing protein | KR76_RS24390 | Not Available | - | 4955028 - 4955792 | 26917.6 |
| aaa family atpase | KR76_RS24395 | Not Available | - | 4955981 - 4956880 | 31728.7 |
| ndma-dependent alcohol dehydrogenase | KR76_RS24400 | Not Available | - | 4956880 - 4957992 | 39214.4 |
| sigma-54-dependent fis family transcriptional regulator | KR76_RS24405 | Not Available | + | 4958172 - 4959782 | 57343.8 |
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS24410 | Not Available | - | 4959786 - 4960307 | 19038.8 |
| fused isobutyryl-coa mutase/gtpase icmf | KR76_RS24415 | Not Available | + | 4960437 - 4963610 | 115656.0 |
| ycii family protein | KR76_RS24420 | Not Available | + | 4963907 - 4964281 | 13601.1 |
| rna polymerase sigma factor | KR76_RS24425 | Not Available | + | 4964351 - 4965613 | 45074.6 |
| arac family transcriptional regulator | KR76_RS24430 | Not Available | - | 4965594 - 4966523 | 33375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.