Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | KR76_RS23210 | Not Available | - | 4697420 - 4698988 | 55778.0 |
| bmp family protein | KR76_RS23215 | Not Available | - | 4698991 - 4699989 | 34962.0 |
| abc transporter substrate-binding protein | KR76_RS31025 | Not Available | - | 4700209 - 4701981 | 64031.6 |
| abc transporter permease | KR76_RS23225 | Not Available | - | 4702076 - 4703074 | 33413.2 |
| sugar abc transporter atp-binding protein | KR76_RS23230 | Not Available | - | 4703058 - 4704572 | 54291.1 |
| sugar abc transporter substrate-binding protein | KR76_RS23235 | Not Available | - | 4704593 - 4705624 | 36411.6 |
| polysaccharide deacetylase family protein | KR76_RS23240 | Not Available | - | 4705704 - 4706546 | 31691.1 |
| nitrilase-related carbon-nitrogen hydrolase | KR76_RS23245 | Not Available | - | 4706583 - 4707455 | 32074.8 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS23250 | Not Available | - | 4707493 - 4708218 | 25100.8 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS23255 | Not Available | - | 4708257 - 4708976 | 25185.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.