Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | KR76_RS23160 | Not Available | - | 4686885 - 4687922 | 35888.7 |
| sugar abc transporter atp-binding protein | KR76_RS23165 | Not Available | - | 4687885 - 4689408 | 53862.8 |
| sugar abc transporter substrate-binding protein | KR76_RS23170 | Not Available | - | 4689440 - 4690582 | 39414.2 |
| plp-dependent aminotransferase family protein | KR76_RS23175 | Not Available | - | 4690695 - 4691948 | 46513.7 |
| mycofactocin-coupled sdr family oxidoreductase | KR76_RS23180 | Not Available | - | 4691991 - 4692824 | 29014.5 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS23185 | Not Available | - | 4692879 - 4693733 | 28276.5 |
| tetr/acrr family transcriptional regulator | KR76_RS28515 | Not Available | + | 4693965 - 4694564 | 21398.2 |
| tetr/acrr family transcriptional regulator | KR76_RS23195 | Not Available | + | 4694561 - 4695163 | 22721.9 |
| abc transporter permease | KR76_RS23200 | Not Available | - | 4695399 - 4696331 | 33250.5 |
| abc transporter permease | KR76_RS23205 | Not Available | - | 4696333 - 4697427 | 37553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.