Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | KR76_RS21985 | Not Available | + | 4457528 - 4458040 | 16852.8 |
| alpha/beta fold hydrolase | KR76_RS21990 | Not Available | + | 4458046 - 4458981 | 34228.2 |
| nitrite reductase small subunit nird | KR76_RS21995 | Not Available | - | 4458899 - 4459330 | 15016.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | KR76_RS22000 | Not Available | + | 4459414 - 4460127 | 23622.5 |
| sensor histidine kinase | KR76_RS22005 | Not Available | - | 4460124 - 4461263 | 40305.7 |
| response regulator transcription factor | KR76_RS22010 | Not Available | - | 4461256 - 4461930 | 24620.5 |
| m15 family metallopeptidase | KR76_RS22015 | Not Available | + | 4462019 - 4462585 | 20384.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | KR76_RS22020 | Not Available | - | 4462598 - 4463212 | 21095.2 |
| card family transcriptional regulator | KR76_RS22025 | Not Available | - | 4463273 - 4463758 | 18281.0 |
| hypothetical protein | KR76_RS30610 | Not Available | + | 4463965 - 4465011 | 36847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.