Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase hrpa | KR76_RS21785 | Not Available | - | 4415662 - 4419510 | 142053.0 |
| hypothetical protein | KR76_RS21790 | Not Available | - | 4419560 - 4420234 | 22708.9 |
| sige family rna polymerase sigma factor | KR76_RS21795 | Not Available | - | 4420231 - 4420737 | 18592.9 |
| ornithine--oxo-acid transaminase | KR76_RS21800 | Not Available | + | 4420922 - 4422151 | 42924.4 |
| saccharopine dehydrogenase c-terminal domain-containing protein | KR76_RS21805 | Not Available | + | 4422148 - 4423260 | 39959.7 |
| aldehyde dehydrogenase family protein | KR76_RS21810 | Not Available | + | 4423260 - 4424771 | 52097.0 |
| voc family protein | KR76_RS21815 | Not Available | + | 4424768 - 4425973 | 43465.4 |
| type 1 glutamine amidotransferase domain-containing protein | KR76_RS21820 | Not Available | - | 4425976 - 4426686 | 25287.3 |
| acetoacetate decarboxylase family protein | KR76_RS21825 | Not Available | - | 4426683 - 4427606 | 33089.6 |
| tetr/acrr family transcriptional regulator | KR76_RS21830 | Not Available | - | 4427692 - 4428267 | 19769.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.