Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | KR76_RS21685 | Not Available | - | 4392277 - 4392936 | 23045.5 |
| sensor histidine kinase | KR76_RS21690 | Not Available | - | 4392933 - 4395002 | 74046.0 |
| hypothetical protein | KR76_RS21695 | Not Available | - | 4395065 - 4395778 | 24422.3 |
| protoporphyrinogen/coproporphyrinogen oxidase | KR76_RS21700 | Not Available | + | 4395948 - 4397300 | 45956.9 |
| duf4349 domain-containing protein | KR76_RS21705 | Not Available | + | 4397335 - 4398306 | 33370.1 |
| mfs transporter | KR76_RS21710 | Not Available | - | 4398200 - 4399579 | 48007.1 |
| nadph-dependent fmn reductase | KR76_RS21715 | Not Available | - | 4399576 - 4400064 | 16803.5 |
| llm class flavin-dependent oxidoreductase | KR76_RS21720 | Not Available | - | 4400061 - 4401221 | 42110.8 |
| sfnb family sulfur acquisition oxidoreductase | KR76_RS21725 | Not Available | - | 4401241 - 4402461 | 42977.7 |
| dimethylsulfone monooxygenase sfng | KR76_RS21730 | Not Available | - | 4402458 - 4403585 | 42167.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.