Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS04855 | Not Available | + | 982182 - 982652 | 17400.7 |
| glycoside hydrolase family 13 protein | KR76_RS04860 | Not Available | - | 982668 - 984263 | 57963.6 |
| hypothetical protein | KR76_RS04865 | Not Available | - | 984260 - 984988 | 25393.0 |
| metal-dependent transcriptional regulator | KR76_RS04870 | Not Available | + | 985074 - 985760 | 25506.6 |
| sir2 family nad-dependent protein deacetylase | KR76_RS04875 | Not Available | - | 985842 - 986714 | 30517.5 |
| protein-l-isoaspartate o-methyltransferase family protein | KR76_RS04880 | Not Available | - | 986711 - 987244 | 18855.1 |
| duf2277 domain-containing protein | KR76_RS04885 | Not Available | - | 987256 - 987522 | 9751.61 |
| beta-propeller domain-containing protein | KR76_RS04890 | Not Available | - | 987549 - 989573 | 72097.8 |
| sige family rna polymerase sigma factor | KR76_RS04895 | Not Available | - | 989570 - 990094 | 19536.0 |
| saccharopine dehydrogenase family protein | KR76_RS04900 | Not Available | + | 990184 - 991374 | 41822.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.