Arachnia propionica

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Arachnia

Description

Pseudopropionibacterium propionicum is a gram-positive, rod-shaped bacterium classified as a mesophilic heterotroph and is an obligate anaerobe. This microbe thrives in environments devoid of oxygen, predominantly found in various anaerobic habitats, including the human gut and the oral cavity, but it can also be isolated from dairy products and soil. As a gram-positive organism, Pseudopropionibacterium propionicum retains the crystal violet stain used in the Gram staining procedure, appearing purple under a microscope. Its rod-like shape contributes to its ability to form clusters or chains, facilitating its survival in anaerobic conditions. Being mesophilic, it grows optimally at moderate temperatures, generally around 30-37°C, which aligns with the body temperatures found in many mammals, including humans. As a heterotroph, Pseudopropionibacterium propionicum requires organic compounds for growth, primarily utilizing carbohydrates and other organic substrates. This metabolic characteristic enables it to thrive in nutrient-rich environments such as the gastrointestinal tract. Its classification as an obligate anaerobe highlights its inability to survive in the presence of oxygen, as oxygen is toxic to its cellular processes. Pseudopropionibacterium propionicum plays a significant role in the fermentation process, particularly in dairy, as it is involved in the production of propionic acid, a key preservative and flavoring agent in certain cheeses, such as Emmental. Additionally, its presence in the human microbiome contributes to maintaining gut health and balance by participating in the complex interplay of microbial communities. This bacterium's unique metabolic pathways and adaptations to anaerobic environments make it a fascinating subject of study in microbiology and food science.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusArachnia
SpeciesArachnia propionica
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Arachnia propionica
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Arachnia propionica

Accession NumberRQZG00000000.1

Gene Summary

Adenine Count

551230 bp

Thymine Count

547715 bp

Guanine Count

1153236 bp

Cytosine Count

1146296 bp

Genome Length

3404168 bp

Protein-coding Genes

3021 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
heat-inducible transcriptional repressor hrcaEL272_RS08305Not Available-1866323 - 186733035965.4
mbl fold metallo-hydrolaseEL272_RS08310Not Available+1867417 - 186826530029.8
inositol monophosphatase family proteinEL272_RS08315Not Available-1868266 - 186904828317.7
duf3097 domain-containing proteinEL272_RS08320Not Available-1869058 - 186990331819.1
hypothetical proteinEL272_RS08325Not Available-1869971 - 187078629473.2
abc transporter atp-binding proteinEL272_RS08330Not Available-1870771 - 187150226202.0
gntr family transcriptional regulatorEL272_RS08335Not Available-1871499 - 187185813381.9
sdr family oxidoreductaseEL272_RS08340Not Available-1871975 - 187266423959.6
nad(+)/nadh kinaseEL272_RS08345Not Available-1872674 - 187354931147.1
spfh domain-containing proteinEL272_RS08350Not Available-1873546 - 187458338136.0

Displaying genes 4781 – 4790 of 6164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0034745glycodeoxycholic acidC26H43NO5Chemical structure of glycodeoxycholic acidNULL
Average449.632Da
Monoisotopic449.314123489Da

Displaying 1–2 of 2 metabolites