Bifidobacterium bifidum str. TMC 3115

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum strain TMC 3115 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, typically associated with the gastrointestinal tracts of various hosts. This species is part of the Bifidobacteriaceae family and is known for its role as a beneficial microbe within the gut microbiome, contributing to the maintenance of gut health and the modulation of the immune system. B. bifidum str. TMC 3115 is adapted to its host-associated habitat, where it engages in fermentative metabolism, utilizing carbohydrates to produce short-chain fatty acids that are pivotal for colonic health. Its anaerobic requirement indicates a preference for environments devoid of oxygen, which aligns with the conditions found in the intestines of mammals. The presence of B. bifidum in the gut microbiota is associated with various beneficial effects, including the enhancement of nutrient absorption and the inhibition of pathogenic microbes, although the precise mechanisms of action and the full spectrum of its interactions within the microbiome remain areas of ongoing research. Understanding the specialized adaptations of B. bifidum str. TMC 3115 enhances our knowledge of gut microbiota composition and its implications for host health, particularly in the context of probiotic applications and gut microbiome modulation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum str. TMC 3115
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum str. TMC 3115

Accession NumberNZ_AP018132.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
fkbp-type peptidyl-prolyl cis-trans isomeraseBBTM_RS00395Not Available+95771 - 9617514051.7
primosomal protein n'BBTM_RS00400Not Available+96234 - 9671217369.6
paqr family membrane homeostasis protein trhaBBTM_RS00405Not Available-97595 - 9848232103.9
sensor histidine kinaseBBTM_RS00410Not Available+98619 - 10010654786.6
whib family transcriptional regulatorBBTM_RS00415Not Available-100241 - 10051910374.4
ftsk/spoiiie domain-containing proteinBBTM_RS00420Not Available-100635 - 10255468850.0
lcp family proteinBBTM_RS00425Not Available-102713 - 10418851570.9
whib family transcriptional regulatorBBTM_RS00430Not Available+104470 - 10476911604.4
glycosyltransferase family 2 proteinBBTM_RS00435Not Available+104803 - 107952112034.0
duf5719 family proteinBBTM_RS00440Not Available+107949 - 10946051074.6

Displaying genes 81 – 90 of 1823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites