Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium bifidum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Bifidobacterium bifidum str. TMC 3115
Accession NumberNZ_AP018132.1
Gene Summary
Adenine Count
407115 bp
Thymine Count
403700 bp
Guanine Count
684818 bp
Cytosine Count
683261 bp
Genome Length
2178894 bp
Protein-coding Genes
1759 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | BBTM_RS02585 | Not Available | - | 573271 - 574257 | 36040.2 |
| metq/nlpa family abc transporter substrate-binding protein | BBTM_RS02590 | Not Available | - | 574635 - 575456 | 29417.0 |
| isoaspartyl peptidase/l-asparaginase family protein | BBTM_RS02600 | Not Available | + | 575883 - 576824 | 32064.4 |
| pyrroline-5-carboxylate reductase | BBTM_RS02605 | Not Available | - | 576979 - 577782 | 27892.8 |
| alpha/beta fold hydrolase | BBTM_RS02610 | Not Available | - | 577866 - 579269 | 51726.9 |
| histidine kinase | BBTM_RS02615 | Not Available | + | 579472 - 582120 | 94441.2 |
| response regulator | BBTM_RS02620 | Not Available | + | 582228 - 582974 | 26630.9 |
| phosphatase pap2 family protein | BBTM_RS02625 | Not Available | - | 583041 - 585896 | 99863.1 |
| abc transporter permease | BBTM_RS02630 | Not Available | - | 586290 - 588998 | 93897.4 |
| abc transporter atp-binding protein | BBTM_RS02635 | Not Available | - | 589025 - 589951 | 33212.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.