Bifidobacterium bifidum str. BF3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum strain BF3 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, primarily associated with host organisms. This strain, like other members of the Bifidobacterium genus, is typically found in the gastrointestinal tracts of mammals, where it plays a vital role in gut health and microbial balance. Bifidobacterium bifidum is known for its ability to ferment a variety of carbohydrates, contributing to the production of short-chain fatty acids, which are crucial for maintaining intestinal health and may exert beneficial effects on the host's immune system. The anaerobic nature of this bacterium highlights its adaptation to the microaerophilic conditions prevalent in the intestines, where it competes with other microbial species for nutrients and colonization sites. Given its habitat and physiological traits, Bifidobacterium bifidum strain BF3 may play an integral role in the modulation of gut microbiota composition and function. This could have implications for overall host health, particularly in the context of gut dysbiosis or during the administration of antibiotics, suggesting that maintaining or restoring populations of this strain may be beneficial in therapeutic applications aimed at enhancing gut microbiome resilience and functionality.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum str. BF3
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum str. BF3

Accession NumberNZ_CP010412.1

Gene Summary

Adenine Count

411886 bp

Thymine Count

413751 bp

Guanine Count

692758 bp

Cytosine Count

691975 bp

Genome Length

2210370 bp

Protein-coding Genes

1789 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nadp-dependent isocitrate dehydrogenaseRY70_RS05160Not Available+1278893 - 128011345337.8
substrate-binding domain-containing proteinRY70_RS05165Not Available+1280296 - 128189455941.9
long-chain fatty acid--coa ligaseRY70_RS05170Not Available-1282041 - 128385565738.5
m23 family metallopeptidaseRY70_RS10065Not Available-1283966 - 128437014128.6
Trna-asnNot AvailableNot Available+1285223 - 1285298Not Available
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadRY70_RS05185Not Available-1285532 - 128657536085.3
ribosomal protein s18-alanine n-acetyltransferaseRY70_RS05190Not Available-1286572 - 128715321289.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabRY70_RS05195Not Available-1287153 - 128801930367.0
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeRY70_RS05200Not Available-1288079 - 128862419346.8
dna polymerase iii subunit deltaRY70_RS05205Not Available-1288844 - 128982135047.1

Displaying genes 1051 – 1060 of 1853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites