Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase / alcohol dehydrogenase | SAMN05216431_10587 | Not Available | - | 877438 - 878820 | 48956.9 |
| hypothetical protein | SAMN05216431_10588 | Not Available | - | 878995 - 879528 | 20430.5 |
| signal transduction histidine kinase | SAMN05216431_10589 | Not Available | - | 879927 - 881252 | 51078.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216431_10590 | Not Available | - | 881230 - 881937 | 27303.2 |
| hypothetical protein | SAMN05216431_10591 | Not Available | - | 882056 - 882520 | 16828.7 |
| peptide deformylase | SAMN05216431_10592 | Not Available | + | 882672 - 883082 | 15509.8 |
| hypothetical protein | SAMN05216431_10593 | Not Available | - | 883110 - 883532 | 15579.7 |
| protein tyrosine phosphatase | SAMN05216431_10594 | Not Available | - | 883893 - 884657 | 29127.6 |
| glycerophosphoryl diester phosphodiesterase | SAMN05216431_10595 | Not Available | - | 884650 - 885336 | 26104.4 |
| cytidine deaminase | SAMN05216431_10596 | Not Available | + | 885481 - 885903 | 15311.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
