Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphonate transport system permease protein | SAMN05216431_10556 | Not Available | + | 840989 - 841804 | 29374.4 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN05216431_10557 | Not Available | + | 841805 - 843367 | 57752.6 |
| aspartate racemase | SAMN05216431_10558 | Not Available | - | 843399 - 844106 | 26728.6 |
| d-aspartate ligase | SAMN05216431_10559 | Not Available | - | 844113 - 845363 | 48760.4 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05216431_10560 | Not Available | - | 845363 - 846865 | 56152.4 |
| uncharacterized protein yvpb | SAMN05216431_10561 | Not Available | - | 846968 - 847864 | 33701.9 |
| hypothetical protein | SAMN05216431_10562 | Not Available | - | 847887 - 848360 | 18013.1 |
| hypothetical protein | SAMN05216431_10563 | Not Available | - | 848462 - 848644 | 6738.8 |
| lysm domain-containing protein | SAMN05216431_10564 | Not Available | - | 848746 - 849345 | 20943.0 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN05216431_10565 | Not Available | - | 849778 - 850476 | 26071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
