Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s9 | SAMN05216431_10885 | Not Available | + | 1258397 - 1258789 | 14260.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN05216431_10886 | Not Available | + | 1258905 - 1260359 | 54861.5 |
| hypothetical protein | SAMN05216431_10887 | Not Available | + | 1260615 - 1260710 | 3435.46 |
| abc transporter | SAMN05216431_10888 | Not Available | + | 1260895 - 1261596 | 25860.9 |
| dna topoisomerase-3 | SAMN05216431_10889 | Not Available | + | 1261678 - 1263747 | 77837.7 |
| hypothetical protein | SAMN05216431_10890 | Not Available | - | 1263781 - 1264068 | 11548.8 |
| exodeoxyribonuclease v alpha subunit | SAMN05216431_10891 | Not Available | + | 1264209 - 1266371 | 83221.8 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN05216431_10892 | Not Available | + | 1266495 - 1267832 | 48810.8 |
| undecaprenyl-diphosphatase | SAMN05216431_10893 | Not Available | - | 1268076 - 1268930 | 32201.8 |
| transcriptional regulator, tetr family | SAMN05216431_10894 | Not Available | + | 1269054 - 1269581 | 20839.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
