Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN05216431_10577 | Not Available | + | 861661 - 862332 | 25167.1 |
| l,d-transpeptidase catalytic domain | SAMN05216431_10578 | Not Available | - | 862363 - 863097 | 28079.2 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05216431_10579 | Not Available | - | 863175 - 864719 | 58249.2 |
| hypothetical protein | SAMN05216431_10580 | Not Available | + | 864866 - 865006 | 5241.23 |
| sortase a | SAMN05216431_10581 | Not Available | - | 865649 - 866296 | 24085.9 |
| dna helicase/exodeoxyribonuclease v, subunit a | SAMN05216431_10582 | Not Available | - | 866296 - 870018 | 141896.0 |
| atp-dependent helicase/nuclease subunit b | SAMN05216431_10583 | Not Available | - | 870018 - 873521 | 134303.0 |
| bleomycin hydrolase | SAMN05216431_10584 | Not Available | - | 873632 - 874948 | 50546.4 |
| ribose-phosphate pyrophosphokinase | SAMN05216431_10585 | Not Available | - | 875050 - 876006 | 34419.1 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN05216431_10586 | Not Available | - | 876091 - 877281 | 44499.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
