Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v alpha subunit | SAMN05216431_104167 | Not Available | + | 775024 - 777384 | 86762.8 |
| lipid kinase, yegs/rv2252/bmru family | SAMN05216431_104168 | Not Available | - | 777416 - 778411 | 37914.6 |
| rnase j1 | SAMN05216431_104169 | Not Available | - | 778520 - 780196 | 61391.4 |
| dna-dependent rna polymerase auxiliary subunit epsilon | SAMN05216431_104170 | Not Available | - | 780196 - 780414 | 8640.03 |
| hypothetical protein | SAMN05216431_104171 | Not Available | + | 780624 - 781112 | 18279.5 |
| peptide deformylase | SAMN05216431_104172 | Not Available | - | 781387 - 781938 | 21051.3 |
| uncharacterized protein ykta, upf0223 family | SAMN05216431_104173 | Not Available | + | 782084 - 782368 | 10762.8 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05216431_104174 | Not Available | + | 782373 - 783140 | 28387.4 |
| gtp-binding protein | SAMN05216431_104175 | Not Available | + | 783287 - 785131 | 68466.8 |
| uncharacterized protein ylan, upf0358 family | SAMN05216431_104176 | Not Available | + | 785310 - 785600 | 10780.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
