Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05216431_104125 | Not Available | + | 738381 - 739688 | 48661.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05216431_104126 | Not Available | + | 739678 - 740343 | 24607.8 |
| dna repair protein radc | SAMN05216431_104127 | Not Available | + | 740382 - 741053 | 25096.5 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05216431_104128 | Not Available | + | 741067 - 741276 | 7646.17 |
| rod shape-determining protein mreb | SAMN05216431_104129 | Not Available | + | 741470 - 742474 | 35402.0 |
| rod shape-determining protein mrec | SAMN05216431_104130 | Not Available | + | 742550 - 743401 | 30802.5 |
| rod shape-determining protein mred | SAMN05216431_104131 | Not Available | + | 743413 - 743925 | 19481.6 |
| septum site-determining protein minc | SAMN05216431_104132 | Not Available | + | 743951 - 744619 | 24026.2 |
| septum site-determining protein mind | SAMN05216431_104133 | Not Available | + | 744619 - 745425 | 29213.6 |
| amino acid abc transporter membrane protein, paat family | SAMN05216431_104135 | Not Available | + | 745728 - 746375 | 23906.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
