Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | + | 1128913 - 1128984 | Not Available |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05216431_10753 | Not Available | + | 1129145 - 1129738 | 21442.9 |
| hypothetical protein | SAMN05216431_10754 | Not Available | - | 1129788 - 1130729 | 35812.5 |
| conserved hypothetical protein, cofd-related | SAMN05216431_10755 | Not Available | - | 1130742 - 1131758 | 37764.4 |
| upf0042 nucleotide-binding protein | SAMN05216431_10756 | Not Available | - | 1131755 - 1132642 | 33501.4 |
| l-serine dehydratase | SAMN05216431_10757 | Not Available | - | 1132746 - 1133627 | 30558.5 |
| l-serine ammonia-lyase | SAMN05216431_10758 | Not Available | - | 1133638 - 1134294 | 23671.8 |
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN05216431_10759 | Not Available | - | 1134439 - 1134912 | 17539.8 |
| excinuclease abc subunit a | SAMN05216431_10760 | Not Available | - | 1134979 - 1137810 | 104129.0 |
| excinuclease abc subunit b | SAMN05216431_10761 | Not Available | - | 1137826 - 1139820 | 75806.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
