Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s15 | SAMN05216431_106131 | Not Available | - | 1065573 - 1065842 | 10405.7 |
| small subunit ribosomal protein s20 | SAMN05216431_106132 | Not Available | + | 1066149 - 1066403 | 9145.17 |
| dna polymerase iii, delta subunit | SAMN05216431_106133 | Not Available | - | 1066440 - 1067477 | 39414.6 |
| competence protein comec | SAMN05216431_106134 | Not Available | - | 1067522 - 1069597 | 78214.3 |
| dcmp deaminase | SAMN05216431_106135 | Not Available | - | 1069768 - 1070247 | 17722.7 |
| competence protein comea | SAMN05216431_106136 | Not Available | - | 1070305 - 1070790 | 17100.2 |
| competence protein comea | SAMN05216431_106137 | Not Available | - | 1070747 - 1071013 | 9805.87 |
| pdz domain-containing protein | SAMN05216431_106138 | Not Available | - | 1071059 - 1072102 | 38354.6 |
| phosphopantetheine adenylyltransferase | SAMN05216431_106139 | Not Available | - | 1072095 - 1072580 | 17855.9 |
| putative transposase | SAMN05216431_106140 | Not Available | - | 1072827 - 1073207 | 14717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
