Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yfho | SAMN05216431_106121 | Not Available | + | 1049590 - 1052205 | 99644.7 |
| signal transduction histidine kinase | SAMN05216431_106122 | Not Available | - | 1052268 - 1053740 | 56080.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216431_106123 | Not Available | - | 1053755 - 1054441 | 26413.7 |
| 6-phosphogluconate dehydrogenase | SAMN05216431_106124 | Not Available | - | 1054668 - 1056092 | 52877.1 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05216431_106125 | Not Available | - | 1056185 - 1057420 | 45735.9 |
| trigger factor | SAMN05216431_106126 | Not Available | - | 1057579 - 1058874 | 48081.3 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05216431_106127 | Not Available | - | 1059029 - 1060216 | 43266.7 |
| hypothetical protein | SAMN05216431_106128 | Not Available | - | 1060427 - 1061302 | 34017.4 |
| ribonuclease j | SAMN05216431_106129 | Not Available | - | 1061343 - 1063142 | 66825.1 |
| polyribonucleotide nucleotidyltransferase | SAMN05216431_106130 | Not Available | - | 1063339 - 1065453 | 76973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
