Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase family protein involved in aluminum resistance | SAMN05216431_106111 | Not Available | - | 1041481 - 1042746 | 47358.5 |
| trna dimethylallyltransferase | SAMN05216431_106112 | Not Available | - | 1042761 - 1043681 | 34583.8 |
| protein of unknown function | SAMN05216431_106113 | Not Available | + | 1043830 - 1044006 | 6502.97 |
| rhodanese-related sulfurtransferase | SAMN05216431_106114 | Not Available | - | 1044058 - 1044477 | 16068.8 |
| glucokinase | SAMN05216431_106115 | Not Available | - | 1044503 - 1045462 | 33406.1 |
| uncharacterized protein yqgq | SAMN05216431_106116 | Not Available | - | 1045455 - 1045694 | 9441.43 |
| rhomboid protease glup | SAMN05216431_106117 | Not Available | - | 1045730 - 1046389 | 24071.4 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05216431_106118 | Not Available | - | 1046404 - 1046949 | 20483.8 |
| lsu ribosomal protein l33p | SAMN05216431_106119 | Not Available | - | 1047013 - 1047162 | 5999.2 |
| cell elongation-specific peptidoglycan d,d-transpeptidase | SAMN05216431_106120 | Not Available | - | 1047298 - 1049364 | 75067.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
