Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus sp. WC1T17 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus sp. WC1T17
Accession NumberFOCC00000000.1
Gene Summary
Adenine Count
552342 bp
Thymine Count
555300 bp
Guanine Count
357601 bp
Cytosine Count
376592 bp
Genome Length
1842330 bp
Protein-coding Genes
1783 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | SAMN05216431_10670 | Not Available | - | 1001571 - 1003010 | 54693.7 |
| helix-turn-helix domain-containing protein | SAMN05216431_10671 | Not Available | - | 1002994 - 1004037 | 40255.8 |
| manganese transport protein | SAMN05216431_10672 | Not Available | + | 1004221 - 1005777 | 55973.5 |
| riboflavin transporter fmnp | SAMN05216431_10673 | Not Available | - | 1005841 - 1006416 | 21048.1 |
| ribosomal large subunit pseudouridine synthase b | SAMN05216431_10675 | Not Available | - | 1006687 - 1007430 | 27940.8 |
| segregation and condensation protein b | SAMN05216431_10676 | Not Available | - | 1007440 - 1008027 | 21396.6 |
| condensin subunit scpa | SAMN05216431_10677 | Not Available | - | 1008017 - 1008784 | 29639.3 |
| riboflavin biosynthesis ribt protein | SAMN05216431_10678 | Not Available | - | 1008777 - 1009142 | 14025.8 |
| integrase/recombinase xerd | SAMN05216431_10679 | Not Available | - | 1009209 - 1010102 | 34050.5 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05216431_10680 | Not Available | - | 1010113 - 1010565 | 17625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
