Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Ligilactobacillus |
| Species | Ligilactobacillus ruminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ligilactobacillus ruminis str. DPC 6830
Accession NumberJHAB00000000.1
Gene Summary
Adenine Count
578732 bp
Thymine Count
579376 bp
Guanine Count
437314 bp
Cytosine Count
448754 bp
Genome Length
2044176 bp
Protein-coding Genes
1923 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease m5 | LRP_1084 | Not Available | - | 1164669 - 1165229 | 21192.1 |
| tatd family hydrolase | LRP_1085 | Not Available | - | 1165222 - 1165992 | 29203.0 |
| methionine--trna ligase | LRP_1086 | Not Available | - | 1166105 - 1168141 | 77286.9 |
| hypothetical protein | LRP_1087 | Not Available | - | 1168234 - 1168953 | 26464.1 |
| sir2 family transcriptional regulator | LRP_1088 | Not Available | - | 1168962 - 1169669 | 26403.7 |
| hydroxymethylglutaryl-coa reductase | LRP_1089 | Not Available | - | 1169662 - 1170933 | 46010.8 |
| amino acid abc superfamily atp binding cassette transporter substrate-binding protein | LRP_1090 | Not Available | + | 1171004 - 1171783 | 29380.5 |
| hypothetical protein | LRP_1091 | Not Available | - | 1172610 - 1172954 | 12510.7 |
| exopolyphosphatase | LRP_1092 | Not Available | - | 1173200 - 1174126 | 34593.0 |
| tryptophan--trna ligase | LRP_1093 | Not Available | - | 1174142 - 1175164 | 38128.6 |
Pathways
1349 pathways
Lysine Biosynthesis
Lysine Biosynthesis
Ornithine Metabolism
Ornithine Metabolism
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Histidine Biosynthesis
Histidine Biosynthesis
Methionine Biosynthesis
Methionine Biosynthesis
Galactose Degradation/Leloir Pathway
Galactose Degradation/Leloir Pathway
