Ligilactobacillus ruminis str. DPC 6830

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus ruminis str. DPC 6830 is a Gram-positive, rod-shaped bacterium that resides in the human gut and exhibits facultative anaerobic metabolism. As a member of the genus Ligilactobacillus, this strain is adapted to thrive in the complex environment of the gastrointestinal tract, where it may contribute to maintaining gut health. Its ability to grow in both the presence and absence of oxygen suggests a versatile metabolic capacity that allows it to utilize available nutrients efficiently, regardless of the local oxygen conditions. The presence of Ligilactobacillus ruminis str. DPC 6830 in the gut microbiota may play a role in digestive processes, potentially influencing fermentation pathways and the production of metabolites beneficial for host health. This strain's adaptability to varying oxygen levels may also suggest a significant role in maintaining microbial balance within the gut ecosystem, particularly during shifts in dietary intake or in response to fluctuations in microbial community composition. Understanding the specific functions and interactions of Ligilactobacillus ruminis str. DPC 6830 within the human gut could provide insights into its contributions to gut homeostasis and its potential applications in probiotic development. Further research could elucidate its metabolic pathways and interactions with other gut microorganisms, enhancing our knowledge of microbial dynamics in health and disease.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus ruminis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus ruminis str. DPC 6830

Accession NumberJHAB00000000.1

Gene Summary

Adenine Count

578732 bp

Thymine Count

579376 bp

Guanine Count

437314 bp

Cytosine Count

448754 bp

Genome Length

2044176 bp

Protein-coding Genes

1923 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
spermidine putrescine abc superfamily atp binding cassette transporter, permease proteinLRP_424Not Available+1198190 - 119899630110.9
spermidine putrescine abc transporter membrane proteinLRP_425Not Available+1198996 - 119983831329.0
spermidine putrescine-binding proteinLRP_426Not Available+1199835 - 120090840972.4
transposase family protein aLRP_427Not Available-1201765 - 120222017988.8
transposaseLRP_428Not Available+1202294 - 120289923557.9
is607 family transposase islasa12LRP_430Not Available+1202984 - 120365026568.2
transposaseLRP_429Not Available-1203651 - 12037875102.17
is200-is605 family transposase islasa8aLRP_551Not Available-1203845 - 120416812010.7
histidyl-trna synthetaseLRP_552Not Available+1204409 - 120571949504.6
aspartyl-trna synthetaseLRP_553Not Available+1205736 - 120749666867.9

Displaying genes 1171 – 1180 of 2011 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites