Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Lachnoclostridium |
| Species | [Clostridium] aminophilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen; rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
[Clostridium] aminophilum
Accession NumberFOIL00000000.1
Gene Summary
Adenine Count
797015 bp
Thymine Count
779067 bp
Guanine Count
823249 bp
Cytosine Count
795937 bp
Genome Length
3198475 bp
Protein-coding Genes
2708 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative cell wall binding repeat-containing protein | SAMN04487771_1003127 | Not Available | + | 460155 - 461501 | 50908.2 |
| hypothetical protein | SAMN04487771_1003128 | Not Available | + | 461750 - 461889 | 5227.39 |
| hypothetical protein | SAMN04487771_10041 | Not Available | + | 461890 - 462155 | 10637.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487771_10043 | Not Available | + | 462323 - 464491 | 81682.6 |
| protein of unknown function | SAMN04487771_10044 | Not Available | + | 464625 - 465743 | 40723.5 |
| transcriptional regulator, tetr family | SAMN04487771_10045 | Not Available | + | 465899 - 466642 | 28299.8 |
| homoserine dehydrogenase | SAMN04487771_10046 | Not Available | - | 466874 - 468166 | 46442.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04487771_10047 | Not Available | + | 468606 - 470543 | 73525.5 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04487771_10048 | Not Available | + | 470540 - 472612 | 79859.3 |
| thioredoxin reductase (nadph) | SAMN04487771_10049 | Not Available | + | 472706 - 473518 | 28556.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.