Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Clostridiaceae
Genus
Clostridium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Clostridiaceae |
| Genus | Clostridium |
| Species | Clostridium beijerinckii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Fresh water - Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Clostridium beijerinckii str. NCIMB 14988
Accession NumberNZ_CP010086.2
Gene Summary
Adenine Count
2285740 bp
Thymine Count
2253892 bp
Guanine Count
982364 bp
Cytosine Count
963398 bp
Genome Length
6485394 bp
Protein-coding Genes
5649 genes
Non-Coding Genes
176 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | LF65_RS06225 | P94464 | + | 1400280 - 1401599 | 49950.5 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | LF65_RS06230 | A6LSK1 | + | 1401611 - 1402672 | 40122.6 |
| stp1/irep family pp2c-type ser/thr phosphatase | LF65_RS06235 | A0AJS6 | + | 1402656 - 1403375 | 26384.2 |
| stk1 family pasta domain-containing ser/thr kinase | LF65_RS06240 | Not Available | + | 1403377 - 1405323 | 70351.1 |
| ribosome small subunit-dependent gtpase a | LF65_RS06245 | A6LSK4 | + | 1405679 - 1406551 | 33323.4 |
| ribulose-phosphate 3-epimerase | LF65_RS06250 | O34557 | + | 1406545 - 1407189 | 23221.2 |
| thiamine diphosphokinase | LF65_RS06255 | O34664 | + | 1407194 - 1407829 | 23681.6 |
| 50s ribosomal protein l28 | LF65_RS06260 | A6LSK7 | - | 1408294 - 1408485 | 7018.68 |
| asp23/gls24 family envelope stress response protein | LF65_RS06265 | O34318 | + | 1409203 - 1409553 | 12831.6 |
| dak2 domain-containing protein | LF65_RS06270 | O34751 | + | 1409567 - 1411207 | 59912.4 |
Pathways
1422 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lysine Biosynthesis
Lysine Biosynthesis
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism
Proline Metabolism
Proline Metabolism
Palmitate Biosynthesis
Palmitate Biosynthesis