Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_04510 | Not Available | + | 931541 - 932503 | 36663.9 |
| glyoxalase | IM33_04515 | Not Available | + | 932941 - 933408 | 18045.4 |
| carbohydrate kinase | IM33_04525 | B5YIM0 | + | 934420 - 936000 | 57854.7 |
| peptidase | IM33_04530 | Not Available | + | 936181 - 936627 | 16176.3 |
| peptidase | IM33_04535 | O26788 | + | 936648 - 937691 | 38524.4 |
| glucose-1-phosphate adenylyltransferase | IM33_04540 | Q18A75 | + | 938473 - 939633 | 43315.1 |
| glucose-1-phosphate adenylyltransferase | IM33_04545 | P39124 | + | 939635 - 940765 | 42806.1 |
| glycogen synthase | IM33_04550 | Q18A79 | + | 940794 - 942236 | 55540.6 |
| maltodextrin phosphorylase | IM33_04555 | P39123 | + | 942250 - 944670 | 93006.7 |
| alpha-amylase | IM33_04560 | P38536 | + | 944675 - 946540 | 72819.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.