Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_04025 | Not Available | + | 839647 - 840501 | 32824.2 |
| glycosyl transferase | IM33_04030 | Not Available | + | 840545 - 841780 | 46776.9 |
| cell wall-binding protein | IM33_04035 | Not Available | + | 841880 - 842833 | 34238.0 |
| nuclease | IM33_04040 | Not Available | - | 843044 - 843397 | 14019.9 |
| hypothetical protein | IM33_04045 | Not Available | + | 843696 - 844607 | 35325.4 |
| hypothetical protein | IM33_04050 | Not Available | + | 844867 - 845301 | 16749.6 |
| hypothetical protein | IM33_04055 | Not Available | + | 845324 - 846859 | 60385.5 |
| peptidase m20 | IM33_04060 | P76052 | + | 846943 - 848310 | 49860.4 |
| nitrogen fixation protein nifu | IM33_04065 | O32119 | + | 848345 - 848569 | 7885.76 |
| membrane protein | IM33_04070 | Not Available | - | 848711 - 849109 | 15009.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.