Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | IM33_00030 | P94605 | + | 6067 - 8493 | 91087.3 |
| hypothetical protein | IM33_00035 | Not Available | + | 8562 - 8858 | 11242.3 |
| hypothetical protein | IM33_00040 | Not Available | + | 8858 - 9118 | 9589.84 |
| anti-sigma factor antagonist | IM33_00045 | P60070 | + | 9130 - 9447 | 11911.6 |
| histidine kinase | IM33_00050 | C3P2P9 | + | 9451 - 9858 | 14841.7 |
| rna polymerase sigma 70 | IM33_00055 | P06574 | + | 9858 - 10631 | 30133.0 |
| aspartate aminotransferase | IM33_00065 | P23034 | - | 11070 - 12254 | 44337.3 |
| ribonucleoside-triphosphate reductase | IM33_00070 | P07071 | + | 12627 - 14978 | 88599.5 |
| ribonucleoside-triphosphate reductase activating protein | IM33_00075 | Q46267 | + | 15000 - 15539 | 20575.9 |
| Trna-asn | Not Available | Not Available | + | 16644 - 16718 | Not Available |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.