Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polypeptide composition of the spore coat protein cotjb | IM33_02515 | Not Available | + | 495575 - 495838 | 10592.2 |
| cotjc | IM33_02520 | Not Available | + | 495899 - 496471 | 21467.6 |
| chloride channel protein | IM33_02525 | Q9KM62 | + | 496998 - 498572 | 56897.1 |
| hypothetical protein | IM33_02530 | Not Available | + | 499098 - 499667 | 22723.2 |
| multidrug abc transporter atp-binding protein | IM33_02550 | Not Available | - | 503381 - 504133 | 27876.8 |
| tetr family transcriptional regulator | IM33_02560 | Not Available | - | 505047 - 505628 | 22665.4 |
| merr family transcriptional regulator | IM33_02565 | Not Available | - | 505753 - 506577 | 32375.6 |
| membrane protein | IM33_02570 | Not Available | - | 506757 - 507650 | 34528.7 |
| transcriptional regulator | IM33_02575 | Not Available | - | 507902 - 508339 | 16883.7 |
| hypothetical protein | IM33_02585 | Not Available | - | 508759 - 508989 | 8509.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.