Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_02110 | Not Available | + | 401509 - 402687 | 41647.1 |
| histidine kinase | IM33_02115 | P94608 | + | 402951 - 404558 | 60994.8 |
| xre family transcriptional regulator | IM33_02120 | Not Available | + | 404549 - 405253 | 26703.2 |
| diguanylate phosphodiesterase | IM33_02125 | Not Available | + | 405801 - 408914 | 121549.0 |
| transcriptional regulator | IM33_02130 | Not Available | + | 408967 - 410253 | 48465.4 |
| peptidase m20 | IM33_02135 | P54542 | - | 410438 - 411544 | 40301.4 |
| aminobenzoyl-glutamate transporter | IM33_02140 | Not Available | - | 411579 - 413120 | 54652.9 |
| amidohydrolase | IM33_02145 | Q501L1 | - | 413694 - 415004 | 47910.5 |
| membrane protein | IM33_02150 | Not Available | - | 415017 - 415487 | 16788.5 |
| membrane protein | IM33_02155 | Not Available | - | 415491 - 416342 | 30051.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.