Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | IM33_19880 | O51111 | - | 4192991 - 4194133 | 42043.6 |
| plasmid stablization protein parb | IM33_19885 | P26497 | - | 4194166 - 4195029 | 32734.7 |
| chromosome partitioning protein | IM33_19890 | P37522 | - | 4195034 - 4195804 | 28274.1 |
| chromosome partitioning protein parb | IM33_19895 | A9VTL7 | - | 4195939 - 4196724 | 29843.4 |
| 16s rrna methyltransferase | IM33_19900 | A8MKR7 | - | 4196888 - 4197607 | 27140.4 |
| trna uridine 5-carboxymethylaminomethyl modification protein | IM33_19905 | Q181S8 | - | 4197600 - 4199495 | 70737.4 |
| trna modification gtpase mnme | IM33_19910 | Q181S7 | - | 4199590 - 4200969 | 51203.6 |
| single-stranded dna-binding protein | IM33_19915 | D0VX24 | - | 4201078 - 4201707 | 24011.1 |
| sporulation protein | IM33_19920 | Q8RHA4 | - | 4201676 - 4202383 | 26518.2 |
| membrane protein insertion efficiency factor | IM33_19925 | A8MKS2 | - | 4202415 - 4202666 | 9899.42 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.