Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | IM33_19625 | A9NGC2 | - | 4145550 - 4146452 | 33117.3 |
| carbohydrate isomerase | IM33_19630 | Q8D1Q8 | - | 4146457 - 4147056 | 21159.2 |
| pts beta-glucoside transporter subunit iibc | IM33_19635 | Not Available | - | 4147114 - 4148385 | 45258.4 |
| pts ascorbate transporter subunit iib | IM33_19640 | Q9EXD8 | - | 4148412 - 4148699 | 10599.9 |
| antitermination protein blgg | IM33_19645 | Not Available | - | 4148714 - 4150801 | 80593.2 |
| caax protease | IM33_19650 | Not Available | - | 4151587 - 4152411 | 31426.2 |
| merr family transcriptional regulator | IM33_19655 | Not Available | - | 4152515 - 4153309 | 31351.9 |
| acetyl-coa hydrolase | IM33_19660 | Not Available | - | 4153843 - 4154691 | 33318.5 |
| membrane protein | IM33_19665 | Not Available | - | 4154729 - 4155241 | 18960.0 |
| hypothetical protein | IM33_19670 | Not Available | - | 4155234 - 4155458 | 8600.85 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.