Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter trk | IM33_19575 | A4XPR4 | - | 4134126 - 4135538 | 51152.3 |
| zn-dependent protease | IM33_19580 | O34458 | - | 4136022 - 4136930 | 35019.1 |
| hypothetical protein | IM33_19585 | Not Available | + | 4137199 - 4137576 | 13667.2 |
| acetyltransferase | IM33_19590 | Q7VG78 | - | 4137732 - 4138181 | 17228.9 |
| hypothetical protein | IM33_19595 | Not Available | - | 4138357 - 4138761 | 15472.0 |
| hypothetical protein | IM33_19600 | P37497 | - | 4138875 - 4139741 | 32287.2 |
| alkylphosphonate utilization protein | IM33_19605 | P0AFJ3 | - | 4140336 - 4140680 | 12366.7 |
| diguanylate cyclase | IM33_19610 | Not Available | - | 4141129 - 4143639 | 98234.0 |
| transcriptional regulator | IM33_19615 | Not Available | - | 4144205 - 4144645 | 16872.2 |
| ketohydroxyglutarate aldolase | IM33_19620 | Not Available | - | 4144821 - 4145453 | 22549.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.