Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl phosphate synthase large subunit | IM33_19425 | Q8XHB3 | - | 4102213 - 4102931 | 26299.8 |
| carbamoyl phosphate synthase large subunit | IM33_19430 | Not Available | - | 4102932 - 4105282 | 87584.4 |
| carbamoyl phosphate synthase small subunit | IM33_19435 | Not Available | - | 4105464 - 4106513 | 38795.7 |
| hypothetical protein | IM33_19440 | Q0TM79 | - | 4106772 - 4107108 | 12524.0 |
| carbamoyl phosphate synthase large subunit | IM33_19445 | Not Available | - | 4107109 - 4109459 | 87605.7 |
| carbamoyl phosphate synthase small subunit | IM33_19450 | Q8XHB2 | - | 4109513 - 4110556 | 38130.1 |
| orotidine 5'-phosphate decarboxylase | IM33_19455 | Q2RK39 | - | 4110582 - 4111298 | 26282.9 |
| metal-binding protein | IM33_19460 | Q57897 | - | 4111677 - 4112312 | 23801.0 |
| hypothetical protein | IM33_19465 | Not Available | - | 4112337 - 4113251 | 35727.6 |
| peptidase m29 | IM33_19470 | P24828 | + | 4113620 - 4114849 | 46262.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.