Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | IM33_19265 | Q39Y84 | - | 4075385 - 4076191 | 29882.3 |
| spore cortex-lytic protein | IM33_19270 | P0A3V1 | - | 4076393 - 4076878 | 18098.0 |
| stage ii sporulation protein r | IM33_19275 | P39151 | - | 4076929 - 4077588 | 25260.2 |
| gntr family transcriptional regulator | IM33_19280 | Not Available | - | 4077732 - 4078412 | 26039.7 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | IM33_19285 | Q181G8 | - | 4078396 - 4079286 | 32901.3 |
| peptidoglycan-binding protein | IM33_19290 | Not Available | - | 4079404 - 4080954 | 58699.8 |
| veg | IM33_19295 | Not Available | - | 4081047 - 4081313 | 10110.4 |
| peptidase u57 | IM33_19300 | P37548 | - | 4081461 - 4082321 | 31956.1 |
| peptidase m19 | IM33_19305 | M1VV65 | - | 4082405 - 4083343 | 35513.8 |
| preprotein translocase subunit seca | IM33_19315 | Not Available | - | 4083613 - 4084110 | 19147.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.