Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysyl-trna synthetase | IM33_19215 | Q8R7N1 | - | 4064310 - 4065839 | 58476.8 |
| transcription elongation factor grea | IM33_19220 | Q181F4 | - | 4065854 - 4066333 | 18014.4 |
| hypothetical protein | IM33_19225 | P45672 | - | 4066442 - 4067410 | 36122.8 |
| pantothenate kinase | IM33_19230 | Q181F7 | - | 4067546 - 4068316 | 27986.1 |
| membrane protein | IM33_19235 | Not Available | - | 4068335 - 4068925 | 20355.2 |
| peptidase s58 | IM33_19240 | P53425 | - | 4069110 - 4070078 | 33794.7 |
| biotin--[acetyl-coa-carboxylase] synthetase | IM33_19245 | E0U174 | - | 4070071 - 4071048 | 36654.2 |
| zinc metalloprotease | IM33_19250 | A6TWP7 | - | 4071365 - 4073335 | 73113.0 |
| trna(ile)-lysidine synthetase | IM33_19255 | Q181G3 | - | 4073369 - 4074757 | 53475.1 |
| hypothetical protein | IM33_19260 | Not Available | - | 4074940 - 4075353 | 15864.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.