Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_19055 | Not Available | - | 4034976 - 4036091 | 39623.5 |
| hypothetical protein | IM33_19060 | Not Available | - | 4036241 - 4037515 | 50774.3 |
| 16s rrna methyltransferase | IM33_19065 | Q181C1 | - | 4037581 - 4038450 | 32403.4 |
| dna primase | IM33_19070 | A5HXX7 | - | 4038621 - 4039151 | 19631.6 |
| iron abc transporter substrate-binding protein | IM33_19075 | P55454 | - | 4039362 - 4040429 | 38846.9 |
| phosphonate abc transporter permease | IM33_19080 | Q44123 | - | 4040441 - 4042129 | 63055.2 |
| phosphonate abc transporter atp-binding protein | IM33_19085 | Q92UV5 | - | 4042147 - 4043142 | 37078.2 |
| phosphoesterase | IM33_19090 | C8WJZ5 | - | 4043143 - 4043979 | 31441.8 |
| phosphonate metabolism protein phnm | IM33_19095 | P16689 | - | 4043983 - 4045152 | 43973.6 |
| phosphonate abc transporter atp-binding protein | IM33_19100 | P16679 | - | 4045153 - 4045866 | 26721.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.