Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | IM33_18950 | P37474 | - | 4010731 - 4014117 | 129938.0 |
| peptidyl-trna hydrolase | IM33_18955 | Q181A2 | - | 4014134 - 4014694 | 20749.2 |
| peptidase | IM33_18960 | Not Available | - | 4014708 - 4015358 | 25056.8 |
| peptidase a24 | IM33_18965 | P15378 | - | 4015462 - 4016244 | 28889.1 |
| twitching motility protein pilt | IM33_18970 | Q06581 | - | 4016225 - 4017307 | 39993.5 |
| hypothetical protein | IM33_18975 | Not Available | - | 4017411 - 4018949 | 58942.6 |
| type iv pilin | IM33_18980 | Not Available | - | 4018970 - 4019497 | 19930.8 |
| type iv pilin | IM33_18985 | Not Available | - | 4019534 - 4020100 | 21441.5 |
| pilus assembly protein | IM33_18990 | Not Available | - | 4020127 - 4021035 | 35222.5 |
| membrane protein | IM33_18995 | Not Available | - | 4021028 - 4022740 | 65160.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.