Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein | IM33_18845 | Q9UYB2 | - | 3989768 - 3990808 | 38245.3 |
| zinc permease | IM33_18850 | Not Available | - | 3990837 - 3991517 | 24006.8 |
| peptide chain release factor 1 | IM33_18855 | Q180Y2 | - | 3991646 - 3992710 | 40038.6 |
| sam-dependent methyltransferase | IM33_18860 | Q97F67 | - | 3992754 - 3993605 | 32220.9 |
| membrane protein | IM33_18865 | P54515 | - | 3993623 - 3994516 | 33899.1 |
| 50s ribosomal protein l31 | IM33_18870 | Q180Y7 | - | 3994661 - 3994861 | 7629.26 |
| transcription termination factor rho | IM33_18875 | Q03222 | - | 3995014 - 3996618 | 60817.7 |
| utp--glucose-1-phosphate uridylyltransferase | IM33_18885 | Not Available | - | 3997118 - 3998083 | 36424.1 |
| oligoendopeptidase f | IM33_18890 | Not Available | - | 3998197 - 4000089 | 72812.3 |
| phosphoprotein phosphatase | IM33_18895 | P37475 | - | 4000440 - 4002812 | 88530.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.