Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha | IM33_01595 | Not Available | + | 294335 - 295372 | 37075.9 |
| fis family transcriptional regulator | IM33_01600 | Not Available | + | 295857 - 297488 | 62101.4 |
| fructose-bisphosphate aldolase | IM33_01605 | O83668 | - | 297875 - 298801 | 32876.4 |
| hypothetical protein | IM33_01610 | Not Available | + | 299131 - 299460 | 12713.1 |
| pseudouridine synthase | IM33_01615 | O32068 | + | 299460 - 300182 | 27257.6 |
| rna methyltransferase | IM33_01620 | Q892Z2 | + | 300215 - 301570 | 50812.8 |
| hypothetical protein | IM33_01630 | Not Available | + | 301881 - 302915 | 38318.9 |
| hypothetical protein | IM33_01635 | Not Available | + | 303002 - 303205 | 6965.66 |
| cell wall-binding protein | IM33_01640 | Not Available | + | 303376 - 304536 | 40933.1 |
| hypothetical protein | IM33_01645 | Not Available | - | 304612 - 304863 | 9633.82 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.