Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit b | IM33_18430 | Q8R8M4 | - | 3922220 - 3924190 | 75635.1 |
| nucleotide pyrophosphatase | IM33_18435 | O94323 | - | 3924377 - 3925639 | 47727.7 |
| abc transporter substrate-binding protein | IM33_18440 | Q8UB32 | - | 3925702 - 3927006 | 48131.1 |
| sugar abc transporter permease | IM33_18445 | A1JID9 | - | 3927037 - 3927897 | 32636.4 |
| abc transporter permease | IM33_18450 | O32155 | - | 3927939 - 3928808 | 32526.3 |
| abc transporter atp-binding protein | IM33_18455 | P94360 | - | 3928792 - 3929862 | 40507.6 |
| siroheme synthase | IM33_18465 | Q3ILQ9 | - | 3930575 - 3931153 | 22198.3 |
| delta-aminolevulinic acid dehydratase | IM33_18470 | P30950 | - | 3931305 - 3932270 | 35930.3 |
| Trna-val | Not Available | Not Available | + | 3933559 - 3933634 | Not Available |
| transposase | IM33_18480 | Not Available | - | 3933392 - 3933563 | 6431.69 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.