Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | IM33_17095 | Not Available | - | 3614297 - 3616864 | 96899.4 |
| histidine kinase | IM33_17100 | Not Available | - | 3617042 - 3618379 | 52275.9 |
| chemotaxis protein chey | IM33_17105 | Q6GK51 | - | 3618373 - 3619083 | 27799.9 |
| hypothetical protein | IM33_17110 | Not Available | - | 3619575 - 3619979 | 16207.8 |
| nadh:flavin oxidoreductase | IM33_17115 | Not Available | - | 3620342 - 3622291 | 70799.5 |
| padr family transcriptional regulator | IM33_17125 | P94443 | + | 3623826 - 3624383 | 21999.6 |
| flavodoxin | IM33_17130 | Not Available | + | 3624706 - 3625455 | 28535.9 |
| arsr family transcriptional regulator | IM33_17135 | Not Available | - | 3625622 - 3625987 | 14042.0 |
| nitroreductase | IM33_17140 | Not Available | - | 3626003 - 3626785 | 29271.8 |
| 6-phospho-beta-glucosidase | IM33_17145 | Not Available | - | 3627272 - 3628699 | 54811.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.