Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | IM33_01440 | Not Available | - | 257808 - 260384 | 96810.7 |
| histidine kinase | IM33_01445 | Q9RC53 | + | 260592 - 261527 | 36446.3 |
| chemotaxis protein chey | IM33_01450 | Q814J1 | + | 261546 - 262283 | 29127.5 |
| hypothetical protein | IM33_01455 | Not Available | - | 262467 - 267524 | 195645.0 |
| hypothetical protein | IM33_01460 | Not Available | - | 267549 - 267968 | 15754.1 |
| hypothetical protein | IM33_01465 | Not Available | - | 268202 - 268453 | 9936.08 |
| hypothetical protein | IM33_01470 | Not Available | + | 268542 - 269291 | 29790.7 |
| metallo-beta-lactamase | IM33_01475 | Not Available | + | 269332 - 270243 | 35118.5 |
| gtp pyrophosphokinase | IM33_01480 | O31611 | + | 270294 - 271106 | 31916.5 |
| serine/threonine protein phosphatase | IM33_01485 | Not Available | + | 271215 - 271907 | 26884.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.