Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pts mannose transporter subunit iic | IM33_01170 | Not Available | + | 201465 - 201866 | 14867.0 |
| pts sugar transporter | IM33_01175 | P37081 | + | 201884 - 202372 | 18045.0 |
| pts sorbose transporter subunit iic | IM33_01180 | P37082 | + | 202399 - 203154 | 26969.0 |
| pts fructose transporter subunit iid | IM33_01185 | Not Available | + | 203154 - 204017 | 31502.1 |
| hypothetical protein | IM33_01190 | Not Available | + | 204064 - 204543 | 18309.9 |
| peptidase m20 | IM33_01195 | Not Available | + | 204607 - 205914 | 48904.0 |
| dna-binding protein | IM33_01200 | Not Available | + | 206876 - 207970 | 41927.1 |
| hypothetical protein | IM33_01205 | Not Available | + | 207975 - 208175 | 7546.81 |
| abc transporter atp-binding protein | IM33_01210 | Not Available | + | 208175 - 209092 | 33541.1 |
| abc transporter permease | IM33_01215 | Not Available | + | 209089 - 209847 | 28216.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.