Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spore photoproduct lyase | IM33_01120 | Q97L63 | + | 192487 - 193509 | 39888.0 |
| arac family transcriptional regulator | IM33_01125 | P28816 | + | 193691 - 194602 | 34574.7 |
| hypothetical protein | IM33_01130 | Not Available | + | 194617 - 195033 | 16355.7 |
| hxlr family transcriptional regulator | IM33_01135 | Not Available | - | 195133 - 195525 | 14802.2 |
| pyridoxamine 5-phosphate oxidase | IM33_01140 | Not Available | + | 195666 - 196061 | 14721.0 |
| hypothetical protein | IM33_01145 | Not Available | + | 196475 - 196681 | 8000.69 |
| hydrolase | IM33_01150 | Q97LP5 | - | 196994 - 197578 | 22105.7 |
| transcriptional antiterminator | IM33_01155 | P23914 | + | 197740 - 200307 | 98411.5 |
| pts mannose transporter subunit iiab | IM33_01160 | Not Available | + | 200537 - 200941 | 14338.4 |
| pts mannose transporter subunit iid | IM33_01165 | Not Available | + | 200965 - 201462 | 19033.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.