Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_13850 | Not Available | - | 2874057 - 2875418 | 51184.6 |
| mannose-6-phosphate isomerase | IM33_13855 | P39841 | + | 2875591 - 2876535 | 35943.2 |
| histidine kinase | IM33_13860 | Not Available | - | 2876647 - 2879385 | 105129.0 |
| translation elongation factor | IM33_13865 | Q46455 | - | 2879490 - 2881373 | 71538.6 |
| selenocysteine synthase | IM33_13870 | Q9S3K3 | - | 2881490 - 2882869 | 51256.9 |
| segregation protein b | IM33_13875 | Q182I1 | - | 2882920 - 2883891 | 34646.1 |
| competence protein come | IM33_13880 | P39694 | - | 2884058 - 2884747 | 25715.4 |
| d-alanyl-d-alanine carboxypeptidase | IM33_13885 | Not Available | + | 2884827 - 2886116 | 48214.5 |
| hypothetical protein | IM33_13890 | Not Available | - | 2886230 - 2886568 | 12696.7 |
| argininosuccinate lyase | IM33_13895 | Q182I5 | - | 2886825 - 2888141 | 49942.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.